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Monday, September 24, 2018

AskScience AMA Series: I'm Alex Marson and I'm an immunologist at UCSF. My lab is building more efficient CRISPR-based gene editing tools to supercharge the human immune system to fight cancer, infectious disease, and autoimmunity. AMA!

AskScience AMA Series: I'm Alex Marson and I'm an immunologist at UCSF. My lab is building more efficient CRISPR-based gene editing tools to supercharge the human immune system to fight cancer, infectious disease, and autoimmunity. AMA!


AskScience AMA Series: I'm Alex Marson and I'm an immunologist at UCSF. My lab is building more efficient CRISPR-based gene editing tools to supercharge the human immune system to fight cancer, infectious disease, and autoimmunity. AMA!

Posted: 24 Sep 2018 04:00 AM PDT

Genetic engineering is now cheap, relatively simple, and pretty reliable - at least when done in a lab setting. Using a tool called CRISPR, researchers can access DNA in live cells, target specific strings of the DNA code to slice out, turn gene expression up or down, or even swap in new DNA. This means we can, theoretically, reverse genetic conditions, modify cell behaviors, and perhaps program the cells to better fight against disease.

If you want an overview on CRISPR and how it works, my university created this animated explainer: https://youtu.be/iXgU--ugLqY

My lab is using CRISPR to better understand how the genome controls the functions of human immune cells, in health and disease. We hope to use this research to inform future cell-based therapies to fight cancer, infectious disease, and autoimmunity.

If you're deeply interested in CRISPR, you may have heard of our recent work - we discovered a way to make CRISPR more efficient and flexible in re-writing long DNA sequences in human immune cells, without the use of viruses. There are currently FDA approved gene engineered T cell therapies for certain types of cancer. These cells have been generated by using modified viruses to deliver genes into haphazard sites in the T cell genomes. Improved non-viral CRISPR delivery allows us, effectively, to paste long new stretches of DNA sequences into specific sites in the genome, without having to rely viruses that are costly and laborious to employ. We are working to develop non-viral CRISPR-based genome targeting into broadly useful platforms to make better, faster, cheaper engineered T cells for the next generation of immunotherapies.

You can read my university's story about it here: http://tiny.ucsf.edu/OccPKL

I'm here to talk about all things CRISPR, genetic engineering, immunology, or any other part of my work. I'll start around 2:30pm PT (5:30 PM ET, 22:30 UT), AMA!

submitted by /u/AskScienceModerator
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Why are people’s palms never dark?

Posted: 23 Sep 2018 08:49 AM PDT

Is there any circumstance in which the coefficient of kinetic friction is greater than the coefficient of static friction?

Posted: 24 Sep 2018 06:21 AM PDT

Just a question my ap physics class is wondering

submitted by /u/Tribefan1029
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What was ocean weather like when Pangea was all together?

Posted: 23 Sep 2018 01:46 PM PDT

Hearing/reading about the effects of climate change on ocean climate got me thinking about the ocean climate in other geologic period. How would tides have been different? Would they have been bigger? Ocean currents, how would they have been affected with all that open ocean? What about storms like hurricanes? Would they have been super huge? I know that's a lot of separate questions.

submitted by /u/camthomas96
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Can you estimate the temperature at a certain depth as a function of the planet's radius?

Posted: 24 Sep 2018 06:39 AM PDT

On Earth, as you dig deeper and deeper into the ground, the temperature increases.

Let's say we have another, reasonably Earth-like planet. Could we determine the rate of this increase purely based on the planet's radius? Would the temperature rise slower on a larger planet?

I am specifically interested in the topmost layers of the planet (where one would reasonably dig a mine or drill or such). I'm not asking about the temperature deep in the core. Also, just a good order-of-magnitude estimate is enough, I understand that specific numbers would likely depend on many factors such as the planet's composition and so on.

Thanks for replies!

submitted by /u/Abdiel_Kavash
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Is the Uncertainty Principle due to the fact scientists do not know enough, or is it genuine chaos?

Posted: 23 Sep 2018 02:28 PM PDT

We learn in Chem 101 that the electron's location is unpredictable and they define this like a law. I'm wondering if theoretical physics, which dives deeper into subatomic particles, has a better understanding. Or, if new discoveries might be made to give a better understanding?

submitted by /u/band_in_DC
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Why does regular soap make bubbles, but modern detergents don't?

Posted: 23 Sep 2018 04:32 PM PDT

I think I've got a good idea how soaps work, and the way they surround oily dirt in a layer of soap molecules to wash it away seems related to how they form double-layers in the wall of a soap bubble. So I'm not surprised that soap cleans and also makes bubbles.

But specially-made detergents for washing machines and dishwashers clean *without* making bubbles. It makes sense that you'd design them that way, if the machine fills up with suds it won't work properly, but chemically, what's the difference between these detergents and regular sudsy soap?

submitted by /u/agate_
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Does Alzheimer‘s affect peoples dreams? How?

Posted: 23 Sep 2018 02:24 PM PDT

A loved one of mine would always say he thought he was dreaming even though he was awake. It led me to believe that in his dreams he was able to live normally while in the physical world it was more of a nightmare since he couldn't get a grasp of his surroundings. Could it be possible that people suffering from Alzheimer's are temporarily 'cured' in their sleep and that's why some believe they are asleep while they are awake?

submitted by /u/fluffyllamapajamas
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Since hydrogen and helium have sufficient bouyant force to float above the atmosphere, would a balloon filled with nothing, like all the air sucked out of it like a vacuum, also float or float higher than hydrogen and helium?

Posted: 23 Sep 2018 05:01 PM PDT

If yes would it also be able to lift more?

Or is the bouyancy of a balloon depending more on whats inside it instead of it having nothing inside?

submitted by /u/_Xyborg_
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To what degree are increases in cancer and terminal illness related to living longer?

Posted: 23 Sep 2018 08:28 AM PDT

Did the Chicxulub asteroid have any impact on Earth's orbit?

Posted: 23 Sep 2018 08:25 AM PDT

Is there a difference in the amount of hydration you get from carbonated and non-carbonated water?

Posted: 23 Sep 2018 09:42 AM PDT

How accurate is it to say that Carboniferous coal beds formed because “the enzymes hadn’t evolved yet”?

Posted: 23 Sep 2018 07:51 AM PDT

Why are curved displays so hard/expensive to make?

Posted: 23 Sep 2018 02:50 PM PDT

Since plants have immune systems just like animals, is it possible for them to have allergies?

Posted: 23 Sep 2018 07:39 AM PDT

What does killing the host gain parasites like Naegleria folweri?

Posted: 23 Sep 2018 02:04 PM PDT

Is this essential for the proliferation of the species, or is this just an unintentional effect of the amoeba on humans?

submitted by /u/pork_king
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Can focusing more light on a photovoltaic cell increase it's energy output?

Posted: 23 Sep 2018 11:45 AM PDT

I have seen several systems that claim to collect 5x or 10x the electricity from photovoltaic cells by using lenses to project more light onto the cell.

Is there data that shows this is possible?

Also, the heat should eventually decrease the efficiency of the cell, so at what point does that happen and does it negate the gain (if any) achieved using the focused light?

submitted by /u/CamReadit
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How do you determine the number of bonding orbitals in a single atom?

Posted: 23 Sep 2018 03:44 PM PDT

I read that fluorine has a 2s orbital and a 2p orbital available; yet, bromine has only a 4p orbital. Both atoms have the same number of valence electrons. Could it have something to do with the 3d orbital in bromine? thanks.

submitted by /u/BirdAcid
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Why is it not possible for the human body to digest hair?

Posted: 23 Sep 2018 05:39 AM PDT

Do other languages use the Oxford comma?

Posted: 23 Sep 2018 07:59 AM PDT

And for those that don't, do they face the same problem of occasional ambiguity?

submitted by /u/locojoco
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Marine Biologists, what do we know the intelligence of dolphins (IQ?) and their capabilities? Also, how far away or close are we to understanding their brains?

Posted: 23 Sep 2018 07:40 AM PDT

Sunday, September 23, 2018

Why is Greenland almost fully glaciated while most of Northern Canada is not at same latitude?

Why is Greenland almost fully glaciated while most of Northern Canada is not at same latitude?


Why is Greenland almost fully glaciated while most of Northern Canada is not at same latitude?

Posted: 22 Sep 2018 02:22 PM PDT

Places near Cape Farewell in Greenland are fully glaciated while northern Canadian mainland is not, e.g. places like Fort Smith at around 60°N. Same goes on for places at 70°N, Cape Brewster in Greenland is glaciated while locations in Canada like Victoria Island aren't? Same goes for places in Siberia of same latitude. Why?

submitted by /u/floatingsaltmine
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What physical features does a polar bears paw have to help grip on ice? And how does it not freeze?

Posted: 22 Sep 2018 06:49 PM PDT

How are mountains formed on areas without tectonic activity?

Posted: 23 Sep 2018 12:51 AM PDT

Why does damped oscillation depend on velocity?

Posted: 23 Sep 2018 07:30 AM PDT

Through Newton's Second Law, we can express damped harmonic oscillation as F=-kx-bv, where b is the damping coefficient. In a system, you would expect friction to be the main thing that causes damping-- yet its equation (F=uN) does not depend on velocity at all. What gives?

submitted by /u/ch00se_username
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Why is carbon 14 radioactive and carbon 13/12 not?

Posted: 22 Sep 2018 02:33 PM PDT

Why does adding an extra neutron to the nucleus make it radioactive?

submitted by /u/aestusLabs
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What causes death when someones neck actauly breaks/snaps?

Posted: 22 Sep 2018 05:32 PM PDT

Sorry if this is the wrong place! I was just curious because what causes the different levels of casualties after a neck breaks? I believe paralysis is the nervous system being cut off but more so the line between like a neck brace or death.

submitted by /u/ForgottenxRage
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AM modulation - What are sidebands?

Posted: 22 Sep 2018 09:19 AM PDT

Hi, I'm studying electronics and communications and our teacher explains things pretty poorly. I didn't understand what the sidebands are. According to what I understood from my teacher, they're the upper and lower borders of the carrier signal's envelope, but according to what I made of wikipedia's first paragraph on the subject they sound more like by-products that exist on different frequencies.

I'm so lost!

submitted by /u/chickenCabbage
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Is unpolarised light made up of lots of different polarised photons OR are the E fields of the photons just rotating and moving around randomly and very quickly giving it the unpolarised aspect?

Posted: 22 Sep 2018 12:46 PM PDT

How can film negatives filter infrared light?

Posted: 23 Sep 2018 01:09 AM PDT

I've seen a couple of videos on making infrared cameras or infrared flashlights by putting film negatives (with no pictures on them) on the sensor/bulb. But how? Can anyone explain this?

submitted by /u/homemadelemonade_vn
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Why is there a flu season? Where does it go?

Posted: 23 Sep 2018 01:05 AM PDT

How do hopping rovers function in a low g environment like an asteroid? Why wouldn't they just float away after the first hop?

Posted: 22 Sep 2018 04:33 PM PDT

[Paleontology] How much does convergent evolution affect confidence in the fossil record taxonomy?

Posted: 22 Sep 2018 07:33 PM PDT

A modern example of Thylacine and Canis skulls:Image

The sheer evolutionary distance is quite stunning - the Methatheria clade diverged at least 125 million years ago, in the upper Cretaceous, and the last common ancestor may have even further back in the Jurassic.

And yet .... what if those skulls are all we ever found? Obviously we now have a clear geographic, geological, and biological background with plenty of detail to delineate the two .... but ...

What of fossils from the distant past?

submitted by /u/Prysorra2
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Why does a high electrical current kill us?

Posted: 22 Sep 2018 11:21 AM PDT

I just feel like it's something everyone knows not to mess with electrical appliances but current is just the movement of charges in a cable (which isn't even that fast). So what would actually have to happen to harm us?

submitted by /u/DaPolakKiddo
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How does ellipticity work in CD-Spectroscopy?

Posted: 22 Sep 2018 04:39 PM PDT

I'm struggling to understand the concept of ellipticity as a unit in CD-Spectroscopy. My main problem is that I don't understand what values for molar/specific and general ellipticity are typical. Or to explain my problem in a different way: I thought that θ can only have values between 0° and 45° but in this study: https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0111341 figure 1 shows values of θ up to an order of magnitude of 6-7.

submitted by /u/Jelly_26
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Why is the asthenosphere a molten liquid?

Posted: 22 Sep 2018 08:13 AM PDT

The asthenosphere is molten silicate rock but further down its solid why ? It goes from the surface Solid Semi sold Molten Solid Why !

submitted by /u/b3n_t
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Research into selective breeding for tameability found that domesticated foxes reach sexual maturity earlier than non-domesticated foxes. What could be a possible reason for this link?

Posted: 21 Sep 2018 09:32 PM PDT

Saturday, September 22, 2018

Would bee hives grow larger if we didn't harvest their honey?

Would bee hives grow larger if we didn't harvest their honey?


Would bee hives grow larger if we didn't harvest their honey?

Posted: 21 Sep 2018 09:02 AM PDT

When a lightning bolt strikes the ground, what happens to it once the ground absorbs it?

Posted: 22 Sep 2018 03:33 AM PDT

How do we know that gravity's effect on time dilation is not an artifact of the effect that gravity has on the electrons orbiting the cesium atom used in atomic clocks to detect time dilation?

Posted: 22 Sep 2018 12:28 AM PDT

How do we know how much times we can recycle plastic, paper, batteries, etc.?

Posted: 22 Sep 2018 07:22 AM PDT

Why is running slightly uphill so much harder than running level?

Posted: 22 Sep 2018 03:57 AM PDT

Can it all be explained by gravity and physics, or is there something about the human body that's just not meant to run at an incline?

submitted by /u/Sayer007
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Do Corvids of different species cooperate in certain situations, and why?

Posted: 22 Sep 2018 05:15 AM PDT

The title. Below are just the two personal observations that prompted my question, which are only here to clarify what i mean with "cooperate":

 

-A bird of prey caught a smaller bird, and both Carrion crows and European magpies, perching on the same branches, "mobbed/scoldet" it their usual manner "together".

-A Carrion crow, a European Magpie, and two Eurasian jays searched for food "together". Wherever one went, the others followed, to search for food "together". I could not see any aggression between any of these birds.

submitted by /u/Tawwz
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Why are the lakes in the far north of North America oval shaped and oriented n/s?

Posted: 21 Sep 2018 06:36 PM PDT

See a sample screenshot here: https://imgur.com/a/8nC6ik0

submitted by /u/conorthearchitect
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At what point in the atmosphere would a person need a space suit to survive?

Posted: 21 Sep 2018 09:34 AM PDT

How do permanent markers work?

Posted: 21 Sep 2018 04:56 PM PDT

Why does a flu shot make your arm hurt a day or two later?

Posted: 21 Sep 2018 07:47 PM PDT

I recently got my flu shot, and I noticed that a day or so later my arm was "sore". This wasn't from the needle, but it felt like I'd been punched and had a bruise (though nothing was visible). I realized that this happens for most vaccinations (I'm old enough that aside from a flu shot the only other ones are things like a Shingles vaccines, tetanus boosters, etc.) Why does this happen?

submitted by /u/dkozinn
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whys it unlikely that a beta particle would have the maximum possible energy?

Posted: 22 Sep 2018 03:40 AM PDT

I know rogue planets (planet-sized objects that don't orbit a star) are theorized in the galaxy but are rogue stars (stars that don't orbit a galaxy) also theorized? Any theories on how prevalent they are?

Posted: 21 Sep 2018 05:18 AM PDT

Why aren’t different dog breeds considered different species?

Posted: 21 Sep 2018 05:55 PM PDT

Animal taxonomy started by classifying animals into different groups of extremely different phenotypes. If chihuahuas and german shepherds were around during Aristotle's time, they would be classified as wildly different animals.

Animal species come into being by selective breeding, whether forced or via natural selection. So why are beagles and mastiffs the same species when, say, red squirrels and gray squirrels are different species?

submitted by /u/BoredAtWork38
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Why is that that "flu season" seems to be in the fall/winter months? Is the virus less communicable throughout the spring and summer?

Posted: 21 Sep 2018 09:44 AM PDT

How fast are molecules travelling in interstellar/intergalactic space?

Posted: 21 Sep 2018 09:33 AM PDT

I know there may not be a good answer since there is no absolute reference frame in space, but do we know what the relative speeds of molecules in space are (to each other perhaps)?

I was wondering this while looking at this chart and seeing stuff like "one molecule per cubic cm or cubic meter" and reading a bit about the mean free paths (and noticing a lack of them for the more extreme vacuums). Do molecules in deep space have other molecules whizzing by them at relativistic speeds? Or are they all relatively stationary to one another? Somewhere in between?

Thanks :)

submitted by /u/Nowbob
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If I’m facing a wind going 65 mph and I drive my car directly into it and proceed to travel at 65 mph, does it take twice the amount of gas as if there no wind at all, and would take less gas than if I was driving in the same direction as the wind going he same speed as the wind?

Posted: 21 Sep 2018 01:43 PM PDT

Given that photons have energy, and mass depends on the energy of an object, how are photons massless?

Posted: 21 Sep 2018 11:17 AM PDT

I get that energy adds mass to an object, I've heard that almost all of the mass of an Atom comes from the way Quarks are bound by the strong force, for example. What I don't understand, then, is how a photon can have no mass, given that it carries energy. Does mass only exist when there are multiple particles interacting?

submitted by /u/Ghodicu
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How do pain relievers reduce fever?

Posted: 21 Sep 2018 10:01 AM PDT

How do medicines like acetaminophen and ibuprofen reduce a fever? Also do they reduce a fever in the same way. I know that acetaminophen does not reduce inflammation so does it affect a fever differently?

submitted by /u/bjamesk4
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In common chimpanzee societies, how do infants/juveniles differ in terms of food access during development?

Posted: 21 Sep 2018 02:22 AM PDT

I'm probably making many assumptions that show a general lack of understanding of chimpanzee behavior, and I apologize for that. Hopefully someone will still try to provide an explanation and show errors in my thinking.

So my questions are:

Do most infants have access to a similar amount of food? Is there a ranking system that determines how much food different infants can get? Which factors lead to inequality in terms of nutrition, if that occurs at all?

submitted by /u/neumann345
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